
Dr. Todd R. Callaway, PhD
Principal Investigator
Professor Ruminant Nutrition and Microbiology, and Preharvest Food Safety
Department of Animal and Dairy Science
University of Georgia
Contact: todd.callaway@uga.edu
Dr. Todd R. Callaway, PhD
Dr. Todd R. Callaway is a ruminant microbiologist whose research focuses on the role of ruminal and intestinal microbes in the nutrition, health, productivity, and food safety of cattle and other food animals. His work is centered on unravelling the microbial ecology of the gut and understanding how diet, environmental factors, microbial physiology, and management can alter microbial populations and host responses.
Dr. Callaway’s research has focused on foodborne pathogenic bacterial populations, antimicrobial resistance transfer, rumen microbial ecology, microbial physiology, and intervention strategies to improve food safety and animal production. His current work at UGA continues to examine how manipulation of ruminal and intestinal microbes can improve production efficiency, animal health, sustainability, and profitability on the farm.

Dr. Francis Fluharty, PhD
Co-Principal Investigator
Professor and Department Head
Department of Animal and Dairy Science
University of Georgia
Contact: FFLUHARTY@uga.edu
Dr. Francis L. Fluharty, PhD
Dr. Francis L. Fluharty, head of the Animal and Dairy Science Department at the University of Georgia, came to UGA in May 2018. He was raised on a cow-calf and stocker operation in Eastern Ohio. He had a 35-year career at The Ohio State University (OSU) prior to coming to UGA. He has worked with agriculturally-based economic development in the U.S. and South America and consulted in feedlot nutrition and management, and forage-based production systems throughout the U.S., Canada, Japan, Chile, Brazil, Argentina, Uruguay, The Netherlands, Belgium, Germany, Ireland, England, France, and Italy, and has given 90 international invited talks as well as 72 invited talks in the United States.
His primary research interests are determining the effects of energy and protein intake on animal growth, fat deposition and carcass composition, and the nutritional requirements of stressed cattle, especially as they relate to rumen function. Dr. Fluharty has devoted his career to improving economic opportunities for farm and ranch families through improved management information. His invited talks cover all aspects of ruminant nutrition and management, as well as marketing branded meat products.

Hunter G. Perez, M.S.
Ph.D. Student: 2025 – Present
M.S., University of Georgia, 2023- 2025
Department of Animal and Dairy Science
University of Georgia
Hunter G. Perez, M.S.
Hunter G. Perez is originally from Palm Coast, Florida, and received his Bachelor of Science in Animal Science from Berry College in Rome, Georgia, in 2023. He completed his M.S. in Animal and Dairy Science at the University of Georgia from 2023 to 2025 and began his Ph.D. in 2025. Hunter is advised by Dr. Todd Callaway and Dr. Francis Fluharty.
Hunter’s research interests include ruminant nutrition, rumen microbiology, feedlot management, food safety, and applied beef cattle production. His master’s research evaluated how forage quality affects E. coli and coliform shedding, rumen fermentation, animal performance, methane emissions, and the ruminal and fecal microbiomes in beef cattle. This work reflects his broader interest in understanding how diet influences the microbial population of the gastrointestinal tract and how unravelling the microbial ecology of the rumen can provide insight into ruminant health, productivity, and food safety.
Within his PhD, Hunter’s research continues to connect ruminant nutrition, microbial ecology, and applied cattle management. His doctoral work is focused on beef cattle nutrition and microbiology, with interests in how animal genetics, diet, management, and environmental stressors may influence ruminal and intestinal microbial populations, animal performance, feed efficiency, and food safety outcomes.
In addition to his research, Hunter assists with lab and project coordination, undergraduate mentorship, student training, extension and outreach activities, and teaching within the Department of Animal and Dairy Science.

Donald “Donnie” Holupka
M.S. Student: 2024 – Present
Department of Animal and Dairy Science
University of Georgia
Donald “Donnie” Holupka
Donald “Donnie” Holupka is a native of Hillsboro, Missouri, and received his Bachelor of Science in Animal Science from the University of Nebraska-Lincoln in the spring of 2024. Donnie began his M.S. program in Animal and Dairy Science at the University of Georgia in 2024 under the advisement of Dr. Todd Callaway and Dr. Francis Fluharty.
Donnie’s research interests include ruminant nutrition, methane reduction, beef cattle production, grazing systems, and the relationship between metabolites and methane production. His master’s research is focused on methane reduction in beef cattle, with an emphasis on understanding metabolites and methane production in southeastern grazing systems. Donnie is also investigating nutritional mitigation strategies to reduce methane production in beef cattle background setting to reduce energetic loss due to methane production.
In addition to his research, Donnie assists with coaching the livestock judging team within the Department of Animal and Dairy Science.

Allison Harikkala
DVM/Ph.D. Student: 2026 – Present
Department of Animal and Dairy Science
University of Georgia
Allison Harikkala
Allison Harikkala was raised in Greenville, Wisconsin, and received her Bachelor of Science in Animal Science from Berry College in 2026. She was accepted into the dual DVM/Ph.D. program, also known as the Veterinary Medical Scientist Training Program (VMSTP) through the University of Georgia College of Veterinary Medicine. As part of this dual-degree program, Allison chose the Department of Animal and Dairy Science to pursue her Ph.D. training. Allison is advised by Dr. Todd Callaway and Dr. Francis Fluharty.
Allison is interested in gaining a deeper understanding of food animal production through hands-on research, animal-based experience, and applied scientific training. Her interests include food animal health, livestock production systems, and the connection between veterinary medicine, animal agriculture, and research.

Austin Jones
M.S. Student: 2026 -Present
Department of Animal and Dairy Science
University of Georgia
Austin Jones
Austin Jones is from Tiger, Georgia, in Rabun County. He received his Bachelor of Science in Animal Bioscience from the University of Georgia and will be continuing in the Department of Animal and Dairy Science as a master’s student in the Ruminant Nutrition and Gut Microbiology Lab.
Austin previously worked with the lab as an undergraduate research assistant, where he gained experience supporting animal research, sample collection, laboratory work, and project activities related to ruminant nutrition and gut microbiology. His interests include applied animal science, food animal production, and understanding how nutrition and management influence animal health and productivity.
Lab Alumni
- Carmen Burner
- Mia Carmichael
- Kymberly Coello
- Dylan Davis
- Jenna Farmer
- Katie Feldmann
- Dr. Regina Fitzpatrick
- Alexa Harvey
- Dr. Shane Hernandez
- Wenyi Huang
- Dr. Sarah Klopatek
- Dr. Osman Yasir Koyun
- Dr. Andrea Osorio
- Dr. Ricardo Apellido Paterno
- Kristen Pisani
- Evann Rowland
- Dr. Darren Seidel
- Claire Stevenson
- Madison Walker
- Madison Warbington
- Dr. Christina Welch
In addition to these lab alumni, we’ve hosted 88 undergraduate researchers and 6 Young Scholars Program participants, as well as a wide range of visiting scientists and postdoctoral scholars.
Visiting Scientists
- Dr. Collins Ateba, Northwest University, South Africa
- Dr. Mohammad Azghadi, Tehran, Iran
- Ricardo Barri, University of Bologna, Italy
- Silvia Carta, University of Sassari, Italy
- Jacquelyn Escarcha, University of Luzon, Philippines
- Yuki Hosoki, Miyarisan Pharmaceuticals, Tokyo, Japan
- Malinee Intanoo, Khon Kaen University, Thailand (with Dr. John Bernard)
- Dr. Fabio Maia, Brazil (with Dr. Lawton Stewart)
- Rebecca Oot, Evergreen State University
- Dr. Andrea M. O. Ramirez, Univ. Queretaro, Mexico
- Ryohei Sato, Miyarisan Pharmaceuticals, Tokyo, Japan
- Fumiya Sugahara, Miyarisan Pharmaceuticals, Tokyo, Japan (S25)
- Dr. Magali Silviera, Brazil (with Dr. Alex Stelzleni)
- Dr. Raul Raya, Tecuman Research Station, Tecuman, Argentina
- Jay Uematsu Miyarisan Pharmaceuticals, Tokyo, Japan
- Peter Varey, Evergreen State University
Postdoctoral Fellows
- Dr. Jeferson Lourenco, UGA
- Dr. Bianca Brown, Yale University (NSF Fellowship)
- Dr. Rim Draief El Jeni, Institut Pasteur Tunis, Tunisia (Fulbright Scholar)
- Dr. Joseph Baloyi, University of Venda, South Africa (Fulbright Scholar)
- Dr. Humayan Kober, Bangladesh (Fulbright Scholar)
- Dr. Arzu Tunc, Turkey (Tubitek International Scholar)
- Dr. Muhammad Aslam, University of Shanghai for Science and Technology (Chinese Academy of Scien
